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{"sheet":"3. KEGG enrichment analysis of ","index":0,"n_rows":122,"n_cols":7,"rows_kept":122,"flags":["formulas_cached_only"]}
["TABLE S3. KEGG enrichment analysis of differentially expressed genes between C2 and C1 groups."]
["#Kegg_pathway","ko_id","Cluster_frequency","Genome_frequency","P-value","Corrected_P-value","rich_factor"]
["Ribosome biogenesis in eukaryotes","ko03008","74 out of 1586 4.66582597730139%","170 out of 9044 1.8796992481203%",{"v":1.06670228205985e-12,"d":"1.07E-12"},{"v":1.28004273847182e-10,"d":"1.28E-10"},2.48221941992434]
["Ribosome","ko03010","287 out of 1586 18.0958385876419%","651 out of 9044 7.19814241486068%",{"v":1.8481882690935e-12,"d":"1.85E-12"},{"v":2.2178259229122e-10,"d":"2.22E-10"},2.51395951131541]
["Other glycan degradation","ko00511","13 out of 1586 0.819672131147541%","23 out of 9044 0.254312251216276%",{"v":2.81463910835467e-05,"d":"2.81E-05"},0.0033775669300256,3.22309337134711]
["Glycosphingolipid biosynthesis - ganglio series","ko00604","5 out of 1586 0.315258511979823%","5 out of 9044 0.0552852720035383%",0.00016498806681254,0.0197985680175048,5.70239596469105]
["Glycosaminoglycan degradation","ko00531","7 out of 1586 0.441361916771753%","11 out of 9044 0.121627598407784%",0.000859924639750203,0.103190956770024,3.62879743207612]
["Flavone and flavonol biosynthesis","ko00944","1 out of 1586 0.0630517023959647%","2 out of 9044 0.0221141088014153%",0.319992915072871,1,2.85119798234552]
["Glycosphingolipid biosynthesis - globo series","ko00603","6 out of 1586 0.378310214375788%","17 out of 9044 0.18796992481203%",0.0622176916893789,1,2.01261034047919]
["Monobactam biosynthesis","ko00261","8 out of 1586 0.504413619167718%","23 out of 9044 0.254312251216276%",0.036122563363894,1,1.98344207467515]
["Flavonoid biosynthesis","ko00941","16 out of 1586 1.00882723833544%","51 out of 9044 0.56390977443609%",0.0113007537118823,1,1.78898696931484]
["Vitamin B6 metabolism","ko00750","8 out of 1586 0.504413619167718%","26 out of 9044 0.287483414418399%",0.0710987476004765,1,1.75458337375109]
["Ascorbate and aldarate metabolism","ko00053","19 out of 1586 1.19798234552333%","65 out of 9044 0.718708536045997%",0.013643769798828,1,1.66685420506354]
["Monoterpenoid biosynthesis","ko00902","2 out of 1586 0.126103404791929%","7 out of 9044 0.0773993808049536%",0.354668416221978,1,1.62925598991173]
["Linoleic acid metabolism","ko00591","6 out of 1586 0.378310214375788%","21 out of 9044 0.232198142414861%",0.148014110839522,1,1.62925598991173]
["Arachidonic acid metabolism","ko00590","9 out of 1586 0.567465321563682%","32 out of 9044 0.353825740822645%",0.0940256636847462,1,1.60379886506936]
["Sphingolipid metabolism","ko00600","11 out of 1586 0.693568726355612%","41 out of 9044 0.453339230429014%",0.0910144267258942,1,1.52991111247809]
["Galactose metabolism","ko00052","26 out of 1586 1.63934426229508%","97 out of 9044 1.07253427686864%",0.0144908300583413,1,1.52847726888626]
["Alanine, aspartate and glutamate metabolism","ko00250","26 out of 1586 1.63934426229508%","102 out of 9044 1.12781954887218%",0.0270400057364188,1,1.45355191256831]
["Fatty acid elongation","ko00062","14 out of 1586 0.882723833543506%","55 out of 9044 0.608137992038921%",0.0892629695040759,1,1.45151897283045]
["beta-Alanine metabolism","ko00410","20 out of 1586 1.26103404791929%","79 out of 9044 0.873507297655905%",0.0513958416974516,1,1.44364454802305]
["alpha-Linolenic acid metabolism","ko00592","21 out of 1586 1.32408575031526%","83 out of 9044 0.917735515258735%",0.0470088504104518,1,1.44277488263267]
["Riboflavin metabolism","ko00740","3 out of 1586 0.189155107187894%","12 out of 9044 0.132684652808492%",0.353594755669268,1,1.42559899117276]
["Histidine metabolism","ko00340","9 out of 1586 0.567465321563682%","38 out of 9044 0.420168067226891%",0.210914563763314,1,1.35056746532156]
["Ether lipid metabolism","ko00565","11 out of 1586 0.693568726355612%","47 out of 9044 0.51968155683326%",0.189534557675539,1,1.33460331088514]
["Sulfur metabolism","ko00920","18 out of 1586 1.13493064312736%","77 out of 9044 0.851393188854489%",0.116627402109723,1,1.3330276281096]
["Selenocompound metabolism","ko00450","8 out of 1586 0.504413619167718%","35 out of 9044 0.386996904024768%",0.262169437788936,1,1.30340479192938]
["Purine metabolism","ko00230","66 out of 1586 4.16141235813367%","290 out of 9044 3.20654577620522%",0.0125761069000415,1,1.29778666782624]
["Glutathione metabolism","ko00480","37 out of 1586 2.33291298865069%","164 out of 9044 1.81335692171605%",0.0576619445125985,1,1.28651616276566]
["Biosynthesis of unsaturated fatty acids","ko01040","12 out of 1586 0.756620428751576%","54 out of 9044 0.597080937638213%",0.227559729645641,1,1.26719910326468]
["Lysine biosynthesis","ko00300","6 out of 1586 0.378310214375788%","27 out of 9044 0.298540468819107%",0.332252376040021,1,1.26719910326468]
["Cutin, suberine and wax biosynthesis","ko00073","13 out of 1586 0.819672131147541%","59 out of 9044 0.652366209641751%",0.224679697615355,1,1.25646012781328]
["Carbon fixation in photosynthetic organisms","ko00710","31 out of 1586 1.95460277427491%","141 out of 9044 1.55904467049978%",0.101031655685052,1,1.25371826174058]
["Nitrogen metabolism","ko00910","19 out of 1586 1.19798234552333%","87 out of 9044 0.961963732861566%",0.177655429237764,1,1.24535084286356]
["Fatty acid degradation","ko00071","19 out of 1586 1.19798234552333%","88 out of 9044 0.973020787262273%",0.191507823193174,1,1.23119912874011]
["Glycine, serine and threonine metabolism","ko00260","30 out of 1586 1.89155107187894%","139 out of 9044 1.53693056169836%",0.125954595320325,1,1.23073294201965]
["Carbon metabolism","ko01200","111 out of 1586 6.99873896595208%","520 out of 9044 5.74966828836798%",0.0122252120061069,1,1.21724221553982]
["One carbon pool by folate","ko00670","9 out of 1586 0.567465321563682%","43 out of 9044 0.475453339230429%",0.336547964707335,1,1.1935247367958]
["Glyoxylate and dicarboxylate metabolism","ko00630","32 out of 1586 2.01765447667087%","153 out of 9044 1.69172932330827%",0.158207128340678,1,1.19265797954323]
["Tryptophan metabolism","ko00380","20 out of 1586 1.26103404791929%","97 out of 9044 1.07253427686864%",0.246995226434148,1,1.17575174529712]
["Cyanoamino acid metabolism","ko00460","23 out of 1586 1.45018915510719%","112 out of 9044 1.23839009287926%",0.233370943802599,1,1.17102774274905]
["Amino sugar and nucleotide sugar metabolism","ko00520","57 out of 1586 3.59394703656999%","278 out of 9044 3.07386112339673%",0.108680647560834,1,1.16919629491867]
["Glycolysis / Gluconeogenesis","ko00010","48 out of 1586 3.02648171500631%","238 out of 9044 2.63157894736842%",0.159585054621614,1,1.1500630517024]
["RNA degradation","ko03018","45 out of 1586 2.83732660781841%","226 out of 9044 2.49889429455993%",0.192931019053371,1,1.13543282482786]
["Fructose and mannose metabolism","ko00051","24 out of 1586 1.51324085750315%","121 out of 9044 1.33790358248563%",0.285544730395802,1,1.13105374506269]
["Plant hormone signal transduction","ko04075","114 out of 1586 7.18789407313997%","585 out of 9044 6.46837682441398%",0.110895842073116,1,1.11123613670902]
["Nicotinate and nicotinamide metabolism","ko00760","6 out of 1586 0.378310214375788%","31 out of 9044 0.342768686421937%",0.467319373425782,1,1.10368954155311]
["Circadian rhythm - plant","ko04712","15 out of 1586 0.94577553593947%","78 out of 9044 0.862450243255197%",0.391503670238469,1,1.09661460859443]
["Limonene and pinene degradation","ko00903","15 out of 1586 0.94577553593947%","78 out of 9044 0.862450243255197%",0.391503670238469,1,1.09661460859443]
["Pyruvate metabolism","ko00620","32 out of 1586 2.01765447667087%","169 out of 9044 1.86864219371959%",0.34512921565524,1,1.07974361461606]
["Citrate cycle (TCA cycle)","ko00020","21 out of 1586 1.32408575031526%","112 out of 9044 1.23839009287926%",0.40521439480343,1,1.06919924337957]
["Stilbenoid, diarylheptanoid and gingerol biosynthesis","ko00945","17 out of 1586 1.0718789407314%","91 out of 9044 1.0061919504644%",0.429041793486665,1,1.06528276263459]
["Phenylalanine metabolism","ko00360","17 out of 1586 1.0718789407314%","91 out of 9044 1.0061919504644%",0.429041793486665,1,1.06528276263459]
["Protein processing in endoplasmic reticulum","ko04141","72 out of 1586 4.53972257250946%","398 out of 9044 4.40070765148165%",0.404246558592244,1,1.0315892197431]
["Tropane, piperidine and pyridine alkaloid biosynthesis","ko00960","13 out of 1586 0.819672131147541%","73 out of 9044 0.807164971251659%",0.52393207058539,1,1.0154951717943]
["Biosynthesis of amino acids","ko01230","87 out of 1586 5.48549810844893%","489 out of 9044 5.40689960194604%",0.458991421658399,1,1.01453670537448]
["Pentose phosphate pathway","ko00030","19 out of 1586 1.19798234552333%","108 out of 9044 1.19416187527643%",0.533842998814857,1,1.00319929008454]
["Sesquiterpenoid and triterpenoid biosynthesis","ko00909","7 out of 1586 0.441361916771753%","41 out of 9044 0.453339230429014%",0.595395994166809,1,0.973579798849691]
["Photosynthesis","ko00195","17 out of 1586 1.0718789407314%","100 out of 9044 1.10570544007077%",0.597763082330265,1,0.969407313997478]
["Glycerolipid metabolism","ko00561","20 out of 1586 1.26103404791929%","118 out of 9044 1.3047324192835%",0.605138071431046,1,0.966507790625601]
["Other types of O-glycan biosynthesis","ko00514","1 out of 1586 0.0630517023959647%","6 out of 9044 0.0663423264042459%",0.685646930355409,1,0.950399327448508]
["Brassinosteroid biosynthesis","ko00905","3 out of 1586 0.189155107187894%","18 out of 9044 0.199026979212738%",0.634935283494084,1,0.950399327448508]
["Starch and sucrose metabolism","ko00500","70 out of 1586 4.41361916771753%","421 out of 9044 4.65501990269792%",0.712018916667209,1,0.948141846860744]
["Propanoate metabolism","ko00640","10 out of 1586 0.630517023959647%","61 out of 9044 0.674480318443167%",0.645408996204899,1,0.93481901060509]
["Valine, leucine and isoleucine degradation","ko00280","15 out of 1586 0.94577553593947%","92 out of 9044 1.0172490048651%",0.664958685626355,1,0.929738472503975]
["Arginine biosynthesis","ko00220","11 out of 1586 0.693568726355612%","68 out of 9044 0.75187969924812%",0.665622958128563,1,0.922446406052964]
["RNA polymerase","ko03020","13 out of 1586 0.819672131147541%","81 out of 9044 0.89562140645732%",0.682944499513555,1,0.915199352357822]
["Cysteine and methionine metabolism","ko00270","32 out of 1586 2.01765447667087%","203 out of 9044 2.24458204334365%",0.775506626111139,1,0.898899856503022]
["Spliceosome","ko03040","55 out of 1586 3.46784363177806%","353 out of 9044 3.9031402034498%",0.855239828695328,1,0.88847529194903]
["Lysine degradation","ko00310","9 out of 1586 0.567465321563682%","58 out of 9044 0.641309155241044%",0.709849292007589,1,0.884854546245162]
["Carotenoid biosynthesis","ko00906","9 out of 1586 0.567465321563682%","59 out of 9044 0.652366209641751%",0.729443298675236,1,0.869857011563041]
["Phenylpropanoid biosynthesis","ko00940","50 out of 1586 3.15258511979823%","328 out of 9044 3.62671384343211%",0.883567273920799,1,0.869267677544367]
["Tyrosine metabolism","ko00350","12 out of 1586 0.756620428751576%","79 out of 9044 0.873507297655905%",0.752605685689909,1,0.86618672881383]
["Plant-pathogen interaction","ko04626","51 out of 1586 3.2156368221942%","338 out of 9044 3.73728438743919%",0.901372086298152,1,0.86042069289717]
["RNA transport","ko03013","51 out of 1586 3.2156368221942%","338 out of 9044 3.73728438743919%",0.901372086298152,1,0.86042069289717]
["Pyrimidine metabolism","ko00240","34 out of 1586 2.1437578814628%","228 out of 9044 2.52100840336134%",0.874963900024284,1,0.850357292980244]
["Arginine and proline metabolism","ko00330","15 out of 1586 0.94577553593947%","103 out of 9044 1.13887660327289%",0.822555976430079,1,0.830446014275395]
["Fatty acid metabolism","ko01212","20 out of 1586 1.26103404791929%","138 out of 9044 1.52587350729766%",0.856424845393143,1,0.826434197781311]
["Thiamine metabolism","ko00730","2 out of 1586 0.126103404791929%","14 out of 9044 0.154798761609907%",0.732772837683392,1,0.814627994955864]
["Taurine and hypotaurine metabolism","ko00430","5 out of 1586 0.315258511979823%","35 out of 9044 0.386996904024768%",0.759679012821747,1,0.814627994955864]
["Phosphatidylinositol signaling system","ko04070","19 out of 1586 1.19798234552333%","134 out of 9044 1.48164528969483%",0.875612474106015,1,0.808548681560671]
["Peroxisome","ko04146","24 out of 1586 1.51324085750315%","171 out of 9044 1.89075630252101%",0.909112912676146,1,0.800336275746112]
["Glycerophospholipid metabolism","ko00564","23 out of 1586 1.45018915510719%","168 out of 9044 1.85758513931889%",0.926676601992585,1,0.780685161832703]
["Protein export","ko03060","15 out of 1586 0.94577553593947%","110 out of 9044 1.21627598407784%",0.889445186532687,1,0.777599449730597]
["Ubiquinone and other terpenoid-quinone biosynthesis","ko00130","11 out of 1586 0.693568726355612%","82 out of 9044 0.906678460858027%",0.873572072331045,1,0.764955556239043]
["Pentose and glucuronate interconversions","ko00040","25 out of 1586 1.57629255989912%","189 out of 9044 2.08978328173375%",0.956653521410242,1,0.754285180514689]
["Inositol phosphate metabolism","ko00562","17 out of 1586 1.0718789407314%","130 out of 9044 1.43741707209199%",0.932731822952723,1,0.745697933844214]
["2-Oxocarboxylic acid metabolism","ko01210","19 out of 1586 1.19798234552333%","146 out of 9044 1.61432994250332%",0.944948973784054,1,0.742092625541986]
["Pantothenate and CoA biosynthesis","ko00770","7 out of 1586 0.441361916771753%","55 out of 9044 0.608137992038921%",0.871223878345286,1,0.725759486415224]
["Steroid biosynthesis","ko00100","10 out of 1586 0.630517023959647%","79 out of 9044 0.873507297655905%",0.906724149764192,1,0.721822274011525]
["Isoquinoline alkaloid biosynthesis","ko00950","6 out of 1586 0.378310214375788%","48 out of 9044 0.530738611233967%",0.869546325930886,1,0.712799495586381]
["Endocytosis","ko04144","36 out of 1586 2.26986128625473%","310 out of 9044 3.42768686421937%",0.998654551792555,1,0.662213724931864]
["Regulation of autophagy","ko04140","8 out of 1586 0.504413619167718%","69 out of 9044 0.762936753648828%",0.934710708442131,1,0.661147358225049]
["Base excision repair","ko03410","7 out of 1586 0.441361916771753%","61 out of 9044 0.674480318443167%",0.928671979525567,1,0.654373307423563]
["Terpenoid backbone biosynthesis","ko00900","11 out of 1586 0.693568726355612%","97 out of 9044 1.07253427686864%",0.965761844896327,1,0.646663459913418]
["C5-Branched dibasic acid metabolism","ko00660","2 out of 1586 0.126103404791929%","18 out of 9044 0.199026979212738%",0.850139670116458,1,0.633599551632338]
["AGE-RAGE signaling pathway in diabetic complications","ko04933","5 out of 1586 0.315258511979823%","45 out of 9044 0.497567448031844%",0.91586284884669,1,0.633599551632338]
["Ubiquitin mediated proteolysis","ko04120","26 out of 1586 1.63934426229508%","254 out of 9044 2.80849181777974%",0.999646536556504,1,0.583709823157351]
["ABC transporters","ko02010","6 out of 1586 0.378310214375788%","59 out of 9044 0.652366209641751%",0.960198554851209,1,0.579904674375361]
["Porphyrin and chlorophyll metabolism","ko00860","8 out of 1586 0.504413619167718%","79 out of 9044 0.873507297655905%",0.97704146432436,1,0.57745781920922]
["Valine, leucine and isoleucine biosynthesis","ko00290","5 out of 1586 0.315258511979823%","50 out of 9044 0.552852720035383%",0.95319047122598,1,0.570239596469105]
["Fatty acid biosynthesis","ko00061","8 out of 1586 0.504413619167718%","82 out of 9044 0.906678460858027%",0.983556865000293,1,0.556331313628395]
["SNARE interactions in vesicular transport","ko04130","7 out of 1586 0.441361916771753%","74 out of 9044 0.818222025652366%",0.983005941760445,1,0.539415834497802]
["Phenylalanine, tyrosine and tryptophan biosynthesis","ko00400","9 out of 1586 0.567465321563682%","97 out of 9044 1.07253427686864%",0.992808965806079,1,0.529088285383705]
["Phagosome","ko04145","17 out of 1586 1.0718789407314%","189 out of 9044 2.08978328173375%",0.999739361629855,1,0.512913922749988]
["Glucosinolate biosynthesis","ko00966","2 out of 1586 0.126103404791929%","23 out of 9044 0.254312251216276%",0.93038589400372,1,0.495860518668787]
["Biotin metabolism","ko00780","3 out of 1586 0.189155107187894%","37 out of 9044 0.409111012826183%",0.969153844481194,1,0.462356429569544]
["Diterpenoid biosynthesis","ko00904","4 out of 1586 0.252206809583859%","50 out of 9044 0.552852720035383%",0.983599564505046,1,0.456191677175284]
["mRNA surveillance pathway","ko03015","21 out of 1586 1.32408575031526%","269 out of 9044 2.97434763379036%",0.999999017390105,1,0.445168458210082]
["Nucleotide excision repair","ko03420","16 out of 1586 1.00882723833544%","207 out of 9044 2.28881026094648%",0.999987716721447,1,0.440764905483366]
["Aminoacyl-tRNA biosynthesis","ko00970","9 out of 1586 0.567465321563682%","123 out of 9044 1.36001769128704%",0.999710206733774,1,0.417248485221296]
["Butanoate metabolism","ko00650","3 out of 1586 0.189155107187894%","41 out of 9044 0.453339230429014%",0.982920635105705,1,0.417248485221296]
["Mismatch repair","ko03430","12 out of 1586 0.756620428751576%","166 out of 9044 1.83547103051747%",0.999969322638063,1,0.412221395037907]
["Zeatin biosynthesis","ko00908","2 out of 1586 0.126103404791929%","30 out of 9044 0.33171163202123%",0.977462523845517,1,0.380159730979403]
["Oxidative phosphorylation","ko00190","17 out of 1586 1.0718789407314%","257 out of 9044 2.84166298098187%",0.999999941787091,1,0.377201289493182]
["DNA replication","ko03030","12 out of 1586 0.756620428751576%","185 out of 9044 2.04555506413092%",0.999997566282895,1,0.369885143655635]
["Folate biosynthesis","ko00790","2 out of 1586 0.126103404791929%","32 out of 9044 0.353825740822645%",0.983809766549972,1,0.35639974779319]
["Homologous recombination","ko03440","10 out of 1586 0.630517023959647%","189 out of 9044 2.08978328173375%",0.99999990460022,1,0.301714072205875]
["Photosynthesis - antenna proteins","ko00196","2 out of 1586 0.126103404791929%","38 out of 9044 0.420168067226891%",0.994100651309618,1,0.300126103404792]
["Proteasome","ko03050","6 out of 1586 0.378310214375788%","120 out of 9044 1.32684652808492%",0.999991685821499,1,0.285119798234552]
["N-Glycan biosynthesis","ko00510","4 out of 1586 0.252206809583859%","80 out of 9044 0.884564352056612%",0.999818533874965,1,0.285119798234552]
["Basal transcription factors","ko03022","3 out of 1586 0.189155107187894%","89 out of 9044 0.984077841662981%",0.999993528579313,1,0.192215594315429]